male/female roots

Hi this is kind of a stupid question but I just started flowering my plants (from seeds)so not sure if male or female, however theyre in a hydroponic system, so if some turn out to be male and i cut them at the base of stem, will their roots still effect the females??

They won't affect them more than any other roots without a plant to support. You'll have to try and get all the roots of it out of there that you can without damaging the other plants, the roots will eventually rot unconnected to the plant.

Alright, thanks man ill do my best with it them bad boys get outa control sometimes

H202 can be a big help should you notice some root rot. Here's a long post explaining it's use.
Hydrogen Peroxide (H2O2) - The Garden's Cure